Research area · week to 3 Oct 2026

Fecal contamination and water quality

Moving in Environmental pollution, Environmental research, bioRxiv, mSystems, Nature Reviews Microbiology, Applied and environmental microbiology, BMJ, Journal of bacteriology.

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Freshwater Microbiomes Shape Viral Inactivation in Continuous Cultures
bioRxiv · 2 Oct 2026 · Preprint
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Synergistic control of microplastic and microbial contamination in stormwater harvesting: new insights into the dual functionality of ferrate in coagulation and disinfection.
Environmental research · 1 Oct 2026 · Journal Article
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Impacts of sewage treatment works versus diffuse pollution on bacterial water quality at rural wild swimming sites.
Environmental pollution · 1 Oct 2026 · Journal Article
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Microplastic retention within infiltration basins used for managed aquifer recharge: Effectiveness and key controlling factors.
Environmental pollution · 1 Oct 2026 · Journal Article
Infiltration basins reduce microplastic concentrations by 70% from surface to deep sediments, demonstrating effective retention within aquifer recharge systems.
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Unit-specific fate and ecological drivers of antibiotic resistome in a full-scale swine wastewater treatment system.
Environmental pollution · 1 Oct 2026 · Journal Article
Anaerobic digestion in swine wastewater treatment removes 70.9% of antibiotic resistance genes, significantly reducing environmental risk in a full-scale system.
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Seasonal phenology and spatiotemporal persistence of fecal coliform contamination in shellfish-harvesting waters of Canada's Pacific and Atlantic coasts.
Environmental pollution · 1 Oct 2026 · Journal Article
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Microbial ecology of shallow groundwater ecosystems.
Nature Reviews Microbiology · 1 Oct 2026 · Review
Microbial communities in shallow groundwater ecosystems are highly diverse and crucial for biogeochemical cycles, yet their active processes and ecological roles remain poorly understood.
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Occurrence and risk assessment of antibiotic residues in Mediterranean olive grove soils with different management: an EU-wide pilot study.
Environmental research · 1 Oct 2026 · Journal Article
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Antibiotic contamination in groundwater across major Chinese basins: Which compounds require priority control?
Environmental research · 1 Oct 2026 · Journal Article
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Thirty years of Achromobacter ruhlandii evolution reveal pathways to epidemic lineages
bioRxiv · 30 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.03.25.714254
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Predictors Recover Most of the Metagenomic Signal for Antibiotic Resistance Gene Occurrence: A Cross-City Test of Geographic Transferability in Urban Wastewater
bioRxiv · 25 Sept 2026 · Preprint
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Robust Inference of Phage Host Infection Dynamics from Sparse Single-Cell Transcriptomic Profiles in Pseudomonas aeruginosa
bioRxiv · 25 Sept 2026 · Preprint
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Design and evaluation of a streamlined enrichment method for faster co-detection of enteric bacterial pathogens in natural soils and environmental samples
medRxiv · 25 Sept 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.09.23.26363803
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Spore-forming Clostridia as overlooked determinants of microbial risk in wastewater reuse systems.
Applied and environmental microbiology · 23 Sept 2026 · Comment
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Species-specific prophage induction by ciprofloxacin in human gut metagenomes.
mSystems · 22 Sept 2026 · Journal Article
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Virome DNA stable isotope probing reveals diverse active soil virus communities across ecosystem contexts.
mSystems · 22 Sept 2026 · Journal Article
Over 5,000 soil virus populations actively lyse microbes involved in carbon cycling, with activity levels varying significantly between agricultural and forest soils.
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Dimensional analysis as a tool for biofilm comparative analysis: bridging the interdisciplinary divides.
Journal of bacteriology · 17 Sept 2026 · Review
Dimensional analysis enables standardized, quantitative comparison of biofilm data across diverse research disciplines, promoting consistency and clarity.
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How does moisture content regulate EPS dynamics and microbial interactions to mediate erosion resistance in sewer sediments?
Environmental research · 15 Sept 2026 · Journal Article
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From correlation to causality: Identifying potential environmental drivers of pathogenic antibiotic-resistant bacteria in river water using causal machine learning.
Environmental pollution · 15 Sept 2026 · Journal Article
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Bacterial SOS response as a potential driver of antibiotic resistance gene transfer in wastewater.
Environmental research · 15 Sept 2026 · Journal Article
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Does AMR surveillance of surface water reflect AMR in humans? A genomic comparison of ESBL-producing Escherichia coli from surface water, healthy residents, and a clinical facility.
Environmental research · 15 Sept 2026 · Journal Article
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Experimental evidence for the role of phages in mitigating antibiotic resistance genes in mangrove sediments.
Environmental pollution · 15 Sept 2026 · Journal Article
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The dissemination of a broad-host-range ARG-carrying plasmid to putative pathogens across agricultural soils.
Environmental pollution · 15 Sept 2026 · Journal Article
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Environmental surveillance of enteric viruses in mussels reveals reduced contamination during the pandemic restriction period.
Environmental pollution · 15 Sept 2026 · Journal Article
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Mapping biological and chemical dimensions of antimicrobial resistance pollution and exposures due to treated wastewater discharges into US surface waters at the national scale.
Environmental pollution · 15 Sept 2026 · Journal Article
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Wastewater-based human gut microbiome surveillance links microbial signatures to population health in Ohio communities.
Environmental research · 15 Sept 2026 · Journal Article
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Translating soil microbiome knowledge into agricultural decisions.
Nature Microbiology · 14 Sept 2026 · Journal Article
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Giardia: everything you need to know about the parasite on the rise.
BMJ · 2 Sept 2026 · Journal Article
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Waterborne diseases and climate change.
Nature Reviews Microbiology · 1 Sept 2026 · Review
Climate change significantly increases waterborne disease risks by altering environmental conditions that affect pathogen transmission, threatening global health progress.
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Ochrobactrum intermedium.
Trends in Microbiology · 1 Sept 2026 · Journal Article
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