Nucleic Acids ResJClub
PED in 2027: integrating experimental and predicted protein conformational ensembles at scale.
Nucleic Acids Research · · Journal Article
Monzon, Ghafouri + more
Abstract ↗AI summary
The abstract is read at the publisher; the summary is JClub's.
PED 2027 expands the Protein Ensemble Database by integrating experimental and computational ensemble collections, including AlphaFlex ensembles for 10 022 human proteins with IDRs.
- Why it matters: Structural ensembles for intrinsically disordered proteins and regions are needed for studying conformational behavior, but deposition and comparison across experimental and prediction methods require standardized, scalable infrastructure.
- What they did: PED 2027 (released September 2026) adds a multi-method collection targeting 3319 DisProt proteins and 2452 curated disordered regions, plus AlphaFlex ensembles for 10 022 human proteins, retaining alternative predictions as independent, provenance-tagged records.
- The result: The platform’s deposition workflow, controlled vocabulary, analysis tools, and redesigned interface/API enable interoperable, analysis-ready discovery, visualization, download, and programmatic access to ensemble descriptors.
The findingWhy it mattersWhat they didThe result