bioRxivJClub
Translating chemical reactions into enzyme sequences enables formate dehydrogenase engineering
bioRxiv · · Preprint · Open access
Mimbrero-Pelegri, Vyas + 8 more
Abstract ↗AI summary
The abstract is read at the publisher; the summary is JClub's.
REXzyme generated 20 soluble formate dehydrogenase variants that all showed CO2-reduction activity, with the top design reaching 2.5-fold higher specific activity than the reference enzyme.
- Why it matters: Enzyme engineering is expensive and often low-yield, and even with generative AI it is hard to bias sequence generation toward enzymes that perform a user-specified chemical reaction.
- What they did: The authors cast enzyme design as translation between chemical reactions and amino-acid sequences, then evaluated REXzyme with in silico metrics and tested it by conditioning generation on CO2 reduction.
- The result: In the formate dehydrogenase reverse reaction setting, reaction-conditioned designs were expressed and purified, and improved activity was achieved while all substitutions were distal to the catalytic site.
The findingWhy it mattersWhat they didThe result
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