Nucleic Acids ResJClub
scMRdb: a comprehensive resource for cell-type-resolved Mendelian randomization of complex traits.
Nucleic Acids Research · · Journal Article
Pan, Wang + 1 more
Abstract ↗AI summary
The abstract is read at the publisher; the summary is JClub's.
scMRdb harmonizes 5206 European and East Asian GWAS datasets with 585 sc-eQTL datasets across 11 tissues and cell systems, enabling cell-type-resolved MR across 110 cell types.
- Why it matters: Bulk-tissue eQTLs can dilute cell-type-specific transcriptional effects, and sc-eQTL MR evidence is fragmented across studies, limiting standardized cross–cell-type comparisons.
- What they did: The resource applies a uniform pipeline to evaluate gene–trait pairs via MR with Steiger directionality testing, then uses colocalization and six confidence tiers plus drug-target annotation.
- The result: It systematically recovers candidate causal genes supported by cell-type-resolved regulatory evidence that is often diluted or obscured in bulk-tissue analyses, supporting mechanistic hypothesis generation and therapeutic target prioritization.
The findingWhy it mattersWhat they didThe result