The periphery of nuclear speckles defines a spatially and temporally regulated compartment of long-lived intron-retained RNAs that resolves during mitosis.
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Long-lived intron-retained RNAs at nuclear speckle periphery are regulated during mitosis, with 20% of transcripts involved in genome maintenance and mitosis.
- Why it matters: Understanding how RNA localization and retention are coordinated with cell-cycle progression is crucial for insights into gene regulation and genome stability, yet this connection remains poorly understood.
- What they did: The study used compartment-resolved transcriptional inhibition, deep learning, and advanced imaging techniques to identify and characterize nuclear RNAs with long-lived retained introns in human pluripotent stem cells, focusing on their spatial distribution and features.
- The result: Findings reveal that these RNAs localize to a conserved nuclear speckle-peripheral niche during interphase, undergo kinase-dependent splicing during mitosis, and are released into the cytoplasm in early G1, linking nuclear organization to temporal RNA regulation.