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Partner determination from protein sequences using class information

bioRxiv · 8 Oct 2026 · Preprint · Open access

Gennai, Caredda + 3 more

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Beyond genes and hotspots: Protein-informed interpretation of cancer mutations.
Cancer Cell · 12 Oct 2026 · Comment
Mapping significantly mutated regions to protein domains and structural features creates a proteo-genomics framework for interpreting cancer mutations beyond genes and hotspots.
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https://jclub.com.au/a/42753737
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A critical evaluation of Gene Ontology priors in biologically-informed neural networks
bioRxiv · 12 Oct 2026 · Preprint
Gene Ontology priors in biologically-informed neural networks mainly organize activations into meaningful units rather than improving performance, with the most promising approach being soft-link encoders.
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https://jclub.com.au/a/10.1101/2025.11.06.686983
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MetworkPy: A Python Package for Graph- and Information-theoretic Investigation of Metabolic Networks
bioRxiv · 11 Oct 2026 · Preprint
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https://jclub.com.au/a/10.64898/2026.05.26.727944
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